SubtiBank SubtiBank
yesU [2018-09-05 11:54:18]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yesU [2018-09-05 11:54:18]

unknown
locus
BSU07030
pI
7.71
mw
25.06 kDa
protein length
220 aa Sequence Blast
gene length
660 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    768,828 → 769,490

    The protein

    Structure

  • [PDB|1OQ1]

    • Expression and Regulation

    Operons

    genes
    [gene|BF0E202739BFD461E418655ECD9C3425AC556FA3|rhgR]-[gene|585CA3154C0405697C4707E5B1D9359963999C54|yesT]-[gene|E4C4AEBA8DAEF7DA1B49432213B2B3EA2AF6B34B|yesU]-[gene|8FE909876A7A21B436CA0CFB90ED190BAD17C8E1|yesV]-[gene|65704140C3B95619D6C0962CB40452D373E2740F|yesW]-[gene|217BAA94FB926CDA7CA8800BC6B08371792CEE31|yesX]-[gene|578B79EB64B804FCAACA73AB22458481371A815C|yesY]-[gene|3226901F1D7C1F21296AB974CAE3656C18BE8F69|yesZ]
    description
    [Pubmed|19651770]

    regulatory mechanism

  • [protein|BF0E202739BFD461E418655ECD9C3425AC556FA3|RhgR]: activation, [Pubmed|19651770], in [regulon|BF0E202739BFD461E418655ECD9C3425AC556FA3|RhgR regulon]

    • regulation

  • induced by pectin ([protein|search|RhgR]) [Pubmed|19651770]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B452 (yesU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1451 NBRP B. subtilis, Japan]
  • BKE07030 (Δ[gene|E4C4AEBA8DAEF7DA1B49432213B2B3EA2AF6B34B|yesU]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTGCGGTACAAGCAAGCGC, downstream forward: _UP4_GCCGTGCATCAAGCGGTGAG
  • BKK07030 (Δ[gene|E4C4AEBA8DAEF7DA1B49432213B2B3EA2AF6B34B|yesU]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTGCGGTACAAGCAAGCGC, downstream forward: _UP4_GCCGTGCATCAAGCGGTGAG

    • References

  • 19651770,17449691